Last updated on 2025-12-18 07:48:44 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.08 | 215.69 | 225.77 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.29 | 246.27 | 261.56 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 170.00 | 180.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 202.00 | 212.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 244.00 | 268.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/119s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.559, system: 0.048, elapsed: 2.016 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.430, system: 0.104, elapsed: 11.668 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.013, elapsed: 0.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.843, system: 0.205, elapsed: 4.794 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.164 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.726, system: 0.391, elapsed: 19.439 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.573, system: 0.054, elapsed: 1.936 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.487, system: 0.208, elapsed: 12.059 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.017, elapsed: 0.296 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.975, system: 0.231, elapsed: 5.167 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.007, elapsed: 0.225 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.953, system: 0.545, elapsed: 20.371 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.736, system: 0.069, elapsed: 2.252 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.396, system: 0.248, elapsed: 11.785 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.014, elapsed: 0.224 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.976, system: 0.228, elapsed: 4.814 seconds]
Computing values for grid cells...
... done. [user: 0.194, system: 0.027, elapsed: 0.305 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.201, system: 0.264, elapsed: 1.040 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.340, system: 0.896, elapsed: 21.306 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.464, system: 0.031, elapsed: 1.844 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.597, system: 0.190, elapsed: 23.073 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.017, elapsed: 0.362 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.276, system: 0.326, elapsed: 7.022 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.012, elapsed: 0.220 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.245, system: 0.719, elapsed: 17.909 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.613, system: 1.333, elapsed: 51.566 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/145s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.674, system: 0.078, elapsed: 2.004 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.756, system: 0.251, elapsed: 14.184 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.017, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.915, system: 0.280, elapsed: 5.878 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.011, elapsed: 0.312 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.286, system: 0.673, elapsed: 23.499 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.765, system: 0.080, elapsed: 2.865 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.893, system: 0.379, elapsed: 17.537 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.018, elapsed: 0.380 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.107, system: 0.327, elapsed: 7.234 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.004, elapsed: 0.346 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.685, system: 0.847, elapsed: 29.330 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.691, system: 0.047, elapsed: 3.894 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.621, system: 0.145, elapsed: 17.295 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.013, elapsed: 0.346 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.870, system: 0.199, elapsed: 6.709 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.005, elapsed: 0.341 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.132, system: 0.259, elapsed: 1.463 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.349, system: 0.703, elapsed: 31.278 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.654, system: 0.033, elapsed: 3.095 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.603, system: 0.071, elapsed: 16.829 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.425 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.765, system: 0.186, elapsed: 6.845 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.257 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.718, system: 0.480, elapsed: 22.734 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.768, system: 0.810, elapsed: 51.513 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64