Last updated on 2025-08-05 04:49:36 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.12 | 247.84 | 261.96 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.96 | 275.20 | 286.16 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.69 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 13.84 | 266.70 | 280.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.83 | 260.48 | 274.31 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 159.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 157.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 242.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/110s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.437, system: 0.042, elapsed: 1.737 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.875, system: 0.124, elapsed: 11.145 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.012, elapsed: 0.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.653, system: 0.187, elapsed: 4.831 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.266 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.831, system: 0.390, elapsed: 18.900 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.463, system: 0.032, elapsed: 2.146 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.897, system: 0.069, elapsed: 13.084 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.424 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.676, system: 0.158, elapsed: 6.852 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.287 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.919, system: 0.295, elapsed: 23.734 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.489, system: 0.026, elapsed: 2.140 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.931, system: 0.061, elapsed: 14.486 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.314 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.611, system: 0.176, elapsed: 6.205 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.005, elapsed: 0.294 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.164, system: 0.223, elapsed: 1.287 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.169, system: 0.523, elapsed: 25.762 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.466, system: 0.030, elapsed: 2.036 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.909, system: 0.076, elapsed: 12.255 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.285 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.686, system: 0.187, elapsed: 5.338 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.243 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.163, system: 0.460, elapsed: 14.023 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.234, system: 0.800, elapsed: 35.204 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/106s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.516, system: 0.051, elapsed: 1.895 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.829, system: 0.071, elapsed: 12.277 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.013, elapsed: 0.252 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.458, system: 0.188, elapsed: 4.902 seconds]
Computing values for grid cells...
... done. [user: 0.157, system: 0.003, elapsed: 0.273 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.675, system: 0.343, elapsed: 20.273 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.468, system: 0.029, elapsed: 2.265 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.870, system: 0.066, elapsed: 14.877 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.543, system: 0.161, elapsed: 5.021 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.210 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.758, system: 0.293, elapsed: 23.448 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.498, system: 0.030, elapsed: 2.014 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.917, system: 0.071, elapsed: 12.698 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.011, elapsed: 0.246 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.385, system: 0.145, elapsed: 4.453 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.191 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.056, system: 0.201, elapsed: 0.864 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.806, system: 0.498, elapsed: 21.244 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.456, system: 0.025, elapsed: 1.954 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.819, system: 0.060, elapsed: 11.899 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.275 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.581, system: 0.185, elapsed: 5.126 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.234 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.979, system: 0.574, elapsed: 13.488 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.831, system: 0.893, elapsed: 33.948 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64