Last updated on 2025-10-08 17:49:49 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.50 | 260.74 | 274.24 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.51 | 260.19 | 270.70 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.26 | 285.36 | 300.62 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.03 | 250.02 | 263.05 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 195.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 212.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 244.00 | 267.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/141s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.431, system: 0.032, elapsed: 2.454 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.948, system: 0.086, elapsed: 15.769 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.370 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.763, system: 0.188, elapsed: 10.216 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.509 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.025, system: 0.345, elapsed: 30.375 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.484, system: 0.031, elapsed: 4.283 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.950, system: 0.062, elapsed: 19.319 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.395 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.732, system: 0.158, elapsed: 6.910 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.294 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.034, system: 0.285, elapsed: 32.390 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.530, system: 0.031, elapsed: 2.363 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.110, system: 0.086, elapsed: 16.234 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.011, elapsed: 0.291 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.783, system: 0.186, elapsed: 6.855 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.251 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.162, system: 0.213, elapsed: 1.083 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.559, system: 0.550, elapsed: 28.044 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.495, system: 0.033, elapsed: 2.410 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.085, system: 0.075, elapsed: 14.412 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.012, elapsed: 0.317 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.724, system: 0.173, elapsed: 6.292 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.281 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.251, system: 0.450, elapsed: 17.474 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.573, system: 0.782, elapsed: 42.331 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/154s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.507, system: 0.042, elapsed: 2.622 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.946, system: 0.082, elapsed: 15.932 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.014, elapsed: 0.386 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.557, system: 0.185, elapsed: 6.716 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.003, elapsed: 0.291 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.883, system: 0.345, elapsed: 26.921 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.563, system: 0.038, elapsed: 2.744 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.792, system: 0.059, elapsed: 23.296 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.180, system: 0.011, elapsed: 0.532 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.709, system: 0.173, elapsed: 11.216 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.006, elapsed: 0.513 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.926, system: 0.311, elapsed: 39.811 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.574, system: 0.036, elapsed: 4.889 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.915, system: 0.074, elapsed: 24.382 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.011, elapsed: 0.499 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.603, system: 0.167, elapsed: 8.417 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.011, elapsed: 0.298 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.080, system: 0.234, elapsed: 1.068 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.150, system: 0.565, elapsed: 41.202 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.508, system: 0.043, elapsed: 2.098 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.044, system: 0.194, elapsed: 13.789 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.015, elapsed: 0.259 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.627, system: 0.217, elapsed: 5.464 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.009, elapsed: 0.285 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.013, system: 0.461, elapsed: 14.582 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.176, system: 0.966, elapsed: 37.594 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64