Last updated on 2026-04-01 20:53:25 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.27 | 260.73 | 275.00 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 12.17 | 338.59 | 350.76 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 303.98 | 325.98 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 347.80 | 378.80 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 195.00 | 216.00 | ERROR | |
| r-patched-linux-x86_64 | 1.1.4 | 12.13 | 329.92 | 342.05 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.16 | 346.01 | 360.17 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 419.00 | 430.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 195.00 | 216.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 427.00 | 437.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 243.00 | 267.00 | OK |
Version: 1.1.4
Check: examples
Result: ERROR
Running examples in 'mapi-Ex.R' failed
The error most likely occurred in:
> ### Name: MAPI_GridHexagonal
> ### Title: Function MAPI_GridHexagonal
> ### Aliases: MAPI_GridHexagonal
>
> ### ** Examples
>
> data("samples")
> # Builds a grid of hexagonal cells according to samples coordinates (columns x and y)
> # using the EPSG:3857 projection and an halfwidth cell value of hw=250m.
> grid <- MAPI_GridHexagonal(samples, crs=3857, hw=250)
Building local cartesian grid...
Flavor: r-devel-windows-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/379s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.589, system: 0.051, elapsed: 2.303 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.537, system: 0.089, elapsed: 12.064 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.224, system: 0.018, elapsed: 0.972 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.602, system: 0.698, elapsed: 40.687 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.183 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.718, system: 0.887, elapsed: 56.951 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.545, system: 0.032, elapsed: 1.896 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.774, system: 0.094, elapsed: 12.985 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.014, elapsed: 0.497 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.643, system: 0.687, elapsed: 48.468 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.168 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.917, system: 0.854, elapsed: 64.719 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.034, elapsed: 2.049 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.684, system: 0.089, elapsed: 13.606 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.304, system: 0.015, elapsed: 0.897 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.992, system: 0.856, elapsed: 122.359 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.004, elapsed: 0.269 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.311, system: 0.319, elapsed: 1.245 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.671, system: 1.356, elapsed: 141.357 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.532, system: 0.038, elapsed: 2.583 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.662, system: 0.076, elapsed: 14.506 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.015, elapsed: 0.886 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.662, system: 0.747, elapsed: 77.702 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.003, elapsed: 0.186 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.425, system: 0.600, elapsed: 11.995 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.409, system: 1.522, elapsed: 109.049 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/375s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.602, system: 0.045, elapsed: 2.226 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.536, system: 0.135, elapsed: 13.303 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.016, elapsed: 0.424 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.409, system: 0.651, elapsed: 22.092 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.005, elapsed: 0.188 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.507, system: 0.876, elapsed: 39.022 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.619, system: 0.038, elapsed: 2.136 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.548, system: 0.119, elapsed: 13.934 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.014, elapsed: 0.408 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.642, system: 0.650, elapsed: 10.432 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.168 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.755, system: 0.844, elapsed: 27.784 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.547, system: 0.031, elapsed: 1.779 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.528, system: 0.060, elapsed: 12.280 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.015, elapsed: 0.983 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.855, system: 0.903, elapsed: 154.187 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.004, elapsed: 0.291 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.221, system: 0.302, elapsed: 1.407 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.217, system: 1.343, elapsed: 171.790 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.611, system: 0.040, elapsed: 3.014 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.871, system: 0.199, elapsed: 17.359 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.020, elapsed: 0.871 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.490, system: 0.754, elapsed: 79.924 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.002, elapsed: 0.158 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.593, system: 0.757, elapsed: 25.162 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.596, system: 1.807, elapsed: 127.533 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64