# Features Extracted from Position Specific Scoring Matrix (PSSM)

## Documentation for package ‘PSSMCOOL’ version 0.2.4

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package README

## Help Pages

PSSMCOOL-package | PSSMCOOL:Extracting Various Feature vectors from PSSM Matrix
aac_pssm | AAC-PSSM feature vectors
aadp_pssm | DPC-PSSM,AAC-PSSM and AADP-PSSM feature vectors
AATP_TPC | AATP_TPC feature vector
AB_PSSM | AB-PSSM feature vector
Averag_Block | Averag Block feature vector
consunsus_sequence | consunsus_sequence
CS_PSe_PSSM | CSP-SegPseP-SegACP feature vector
DFMCA_PSSM | DMACA-PSSM feature
Discrete_Cosine_Transform | Discrete Cosin Transform Feature
disulfid | Disulfide connectivity feature
dpc_pssm | DPC_PSSM feature vector
DP_PSSM | DP_PSSM feature vector
dwt_PSSM | discrete wavelet transform feature vector
EDP_EEDP_MEDP | EDP_EEDP_MEDP feature vector
FPSSM | D-FPSSM and SF-PSSM feature vectors
FPSSM2 | Mixture of Two FPSSM Features
grey_pssm_pseAAC | grey pssm feature vector
kiderafactor | kiderafactor feature
k_mers | 3-mer and 2-mer in dataframe
k_separated_bigrams_pssm | k_separated_bigrams_pssm feature vector
LPC_PSSM | Linear predictive coding feature
MBMGACPSSM | MBMGACPSSM feature
pse_pssm | pseudo position-specific scoring matrix feature
pssm400 | PSSM400 feature
PSSMBLOCK | PSSM BLOCK feature vector
pssm_ac | auto covariance transformation feature vector
pssm_cc | Cross covarianse feature vector
pssm_composition | PSSM-COMPOSITION feature
PSSM_SD | PSSM-SD feature
pssm_seg | PSSM-Seg feature vector
RPM_PSSM | RPM-PSSM feature vector
rpssm | RPSSM feature
scsh2 | SCSH Feature vector
single_Average | single Average feature
smoothed_PSSM | smoothed PSSM feature
SOMA_PSSM | SOMA PSSM Feature
SVD_PSSM | Singular Value Decomposition (SVD)
three_mer | 3-Mer and 2-Mer
trigrame_pssm | trigrame feature vector