# Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files

## Documentation for package ‘RDML’ version 1.1

- DESCRIPTION file
- Package README

## Help Pages

adpsType | adpsType R6 class.
annotationType | annotationType R6 class.
as.character.idType | Convert 'idType' object to 'character'
as.character.reactIdType | Convert 'reactIdType' object to 'character'
AsDendrogram | 'RDML$AsDendrogram()' wrapper
AsTable | 'RDML$AsTable()' wrapper
baseTemperatureType | baseTemperatureType R6 class.
cdnaSynthesisMethodType | cdnaSynthesisMethodType R6 class.
commercialAssayType | commercialAssayType R6 class.
cqDetectionMethodType | cqDetectionMethodType R6 class.
dataCollectionSoftwareType | dataCollectionSoftwareType R6 class.
dataType | dataType R6 class.
documentationType | documentationType R6 class.
dyeType | dyeType R6 class.
enumType | enumType R6 class.
experimenterType | experimenterType R6 class.
experimentType | experimentType R6 class.
GetFData | 'RDML$GetFData()' wrapper
gradientType | gradientType R6 class.
idReferencesType | idReferencesType R6 class.
idType | idType R6 class.
labelFormatType | labelFormatType R6 class.
lidOpenType | lidOpenType R6 class.
loopType | loopType R6 class.
mdpsType | mdpsType R6 class.
measureType | measureType R6 class.
MergeRDMLs | Merges 'RDML' objects
new | Creates new instance of 'RDML' class object
nucleotideType | nucleotideType R6 class.
oligoType | oligoType R6 class.
pauseType | pauseType R6 class.
pcrFormatType | pcrFormatType R6 class.
primingMethodType | primingMethodType R6 class.
quantityType | quantityType R6 class.
quantityUnitType | quantityUnitType R6 class.
RDML | R6 class 'RDML' - contains methods to read and overview fluorescence data from RDML v1.1 and v1.2 format files
RDML.AsDendrogram | Represents structure of 'RDML' file as dendrogram
RDML.AsTable | Represents fields of 'RDML' object as 'data.frame'
RDML.GetFData | Gets fluorescence data vectors from 'RDML' object
RDML.new | Creates new instance of 'RDML' class object
RDML.SetFData | Sets fluorescence data vectors to 'RDML' object
rdmlBaseType | Base R6 class for RDML package.
rdmlEdit | RDML Editor Graphical User Interface
rdmlIdType | rdmlIdType R6 class.
reactIdType | reactIdType R6 class.
reactType | reactType R6 class.
runType | runType R6 class.
sampleType | sampleType R6 class.
sampleTypeType | sampleTypeType R6 class.
sequencesType | sequencesType R6 class.
SetFData | 'RDML$SetFData()' wrapper
stepType | stepType R6 class.
targetType | targetType R6 class.
targetTypeType | targetTypeType R6 class.
temperatureType | temperatureType R6 class.
templateQuantityType | templateQuantityType R6 class.
thermalCyclingConditionsType | thermalCyclingConditionsType R6 class.
xRefType | xRefType R6 class.
[.GetFData | Extract data points from 'RDML' object
[.RDML | Extract data points from 'RDML' object